BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036F04SP1|AL430256
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig746 1401 0.0
>3x_Contig746
Length = 3129
Score = 1401 bits (706), Expect = 0.0
Identities = 724/728 (99%), Gaps = 2/728 (0%)
Strand = Plus / Plus
Query: 195 catcatcatggtcctcgtcttcttcatcgtcactaccgacaagtgagttgaacttcaatg 254
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catcatcatggccctcgtcttcttcatcgtcactaccgacaagtgagttgaacttcaatg 61
Query: 255 cactatctacaaagaagtcgaccaattttcctctagtgtcaagctgtagggtatttccgg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cactatctacaaagaagtcgaccaattttcctctagtgtcaagctgtagggtatttccgg 121
Query: 315 agttggaaccaatccagatccttagcttaccactgatgtattcgagtttggcactgatct 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agttggaaccaatccagatccttagcttaccactgatgtattcgagtttggcactgatct 181
Query: 375 tactgatgtcctcgatgttttcatgattatccagtactttcttgatagcgatgtacaggg 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tactgatgtcctcgatgttttcatgattatccagtactttcttgatagcgatgtacaggg 241
Query: 435 agaacacagataatatcgatagattctcatcaagcaatgatagagggattctgttaaccc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agaacacagataatatcgatagattctcatcaagcaatgatagagggattctgttaaccc 301
Query: 495 aatatgacacttcgtagaattttttctctgagattaatgaggaaattatgcaggaatgta 554
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatatgacact-cgtagaattttttctctgagattaatgaggaaattatgcaggaatgta 360
Query: 555 gaattctgacgatatcatttttagaatcagcatctagagatgatttttctacttttagtt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaattctgacgatatcatttttagaatcagcatctagagatgatttttctacttttagtt 420
Query: 615 tgtcagtgagctctttgatatgattatkcgatggatggaaaatacagtcgagtattggcg 674
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 tgtcagtgagctctttgatatgattattcgatggatggaaaatacagtcgagtattggcg 480
Query: 675 tcaatcctaaagattcaaattctttgttgccctttacggagtccttaaaaatgtcatcaa 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaatcctaaagattcaaattctttgttgccctttacggagtccttaaaaatgtcatcaa 540
Query: 735 tttgagatacggcagattcatcatcttcgcaagaaactaggaagacatcattgatcacag 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttgagatacggcagattcatcatcttcgcaagaaactaggaagacatcattgatcacag 600
Query: 795 attcgaccttttgattaatgatagagctgtttacaaattgaacaaagctgggatagattg 854
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 601 attcgaccttttgattaatgatagagctgtttacaaattgaacaaagct-ggatagattg 659
Query: 855 aatccatccttactctctgtcaacttcgacaacaacgtttcatttcctaaagtttcttcg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aatccatccttactctctgtcaacttcgacaacaacgtttcatttcctaaagtttcttcg 719
Query: 915 atgctggc 922
||||||||
Sbjct: 720 atgctggc 727
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8043
Number of Sequences: 1807
Number of extensions: 8043
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)